Resources Contact Us Home
Browse by: INVENTOR PATENT HOLDER PATENT NUMBER DATE
 
 
Mammalian checkpoint proteins polypeptides and encoding sequences thereof
RE40789 Mammalian checkpoint proteins polypeptides and encoding sequences thereof

Patent Drawings:
Inventor: Elledge, et al.
Date Issued: June 23, 2009
Application: 10/267,717
Filed: October 9, 2002
Inventors: Elledge; Stephen J. (Houston, TX)
Sanchez; Yolanda (Cincinnati, OH)
Assignee: Baylor College of Medicine (Houston, TX)
Primary Examiner: Sisson; Bradley L
Assistant Examiner:
Attorney Or Agent: Sickler; Jennifer S.Molen; Monique VanderSewell; Gardere Wynne
U.S. Class: 435/194; 435/193; 530/324; 530/326; 530/350
Field Of Search: 530/350; 530/326; 530/827; 536/23.5; 435/69.1; 435/252.3; 435/320.1
International Class: C12N 9/12; A61K 38/00; C07K 1/00; C12N 9/10
U.S Patent Documents:
Foreign Patent Documents:
Other References: Sanchez et al., Science, (Sep. 1997), vol. 277, pp. 1497-1501. cited by examiner.
Walworth et al., "rad-Dependent Response of the chk1-Encoded Protein Kinase at the DNA Damage Checkpoint," Science, News Series, vol. 271, No. 5247 (Jan. 19, 1996) pp. 353-356. cited by examiner.
Sanchez et al., "Conservation of the Chk1 Checkpoint Pathway in Mammals: Linkage to DNA Damage to Cdk Regulation Through Cdc25," Science, Sep. 5, 1997, pp. 197-1501. cited by examiner.
O'Connell et al., "Chk1 is a wee1 kinase in the G2 DNA Damage checkpoint inhibiting cdc2 by Y15 phosphorylation," The EMBO Journal, vol. 16, No. 3, Feb. 1997, pp. 545-554. cited by examiner.
Borges et al., Journal of Immunological Methods, vol. 173 (1994), pp. 253-263. cited by examiner.
Hideo Toyoshima and Tony Hunter, "p27, A Novel Inhibitors of G1 Cyclin-Cdk Protein Kinase Activity, is Related to p21," Cell, vol. 78, Jul. 15, 1994, pp. 67-74. cited by other.
Shou Waga, Gregory J. Hannon, David Beach & Bruce Stillman, "The p21 Inhibitor of Cyclin-Dependent Kinases Controls DNA Replication by Interaction With PCNA," Nature, vol. 369, Jun. 16, 1994, pp. 574-578. cited by other.
Stephen J. Elledge and J. Wade Harper, "Cdk Inhibitors: on the Threshold of Checkpoints and Development," Cell Biology, 1994, pp. 847-850. cited by other.
Jin Jen, J. Wade Harper, Sandra H. Bigner, Darell D. Bigner, Nickolas Papadopoulos, Sanford Markowitz, James K.V. Willson, Kenneth W. Kinzler and Bert Vogelstein, "Deletion of p16 and p15 Genes in Brain Tumors," Cancer Research, Dec. 15, 1994, pp.6353-6358. cited by other.
Gregory J. Hannon and David Beach, "p15 .sup.INK48 is a Potential Effector of TGF-B-Induced Cell Cycle Arrest," Nature, vol. 371, Sep. 15, 1994, pp. 257-261. cited by other.
Jamison Nourse, Eduardo Firpo, W. Michael Flanagan, Steve Coats, Kornella Polyak, Mong-Hong Lee, Joan Massague, Gerald R. Crabtree and James M. Roberts, "Interleukin-2-Mediated Elimination of the p27.sup.K1p1 Cyclin-Dependent Kinase InhibitorPrevented by Rapamycin," Nature, vol. 372, Dec. 8, 1994, pp. 570-573. cited by other.
Jun-Ya Kato, Masaaki Matsuoka, Kornelia Polyak, Joan Massague and Charles J. Sherr, "Cyclin Amp-Induced G1 Phase Arrest Mediated by an Inhibitor (p27.sup.Kip1) of cyclin-Dependent Kinase 4 Activation," Cell, vol. 79, Nov. 4, 1994, pp. 487-496. citedby other.
Hideo Toyoshima and Tony Hunter, "p27, A Novel Inhibotor of G1 Cyclin-CDK Protein Kinase Activity, is Related to p21," Cell, vol. 78, Jul. 15, 1994, pp. 67-74. cited by other.
Kornelia Polyak, Mong-Hong Lee, Hediye Erdument-Bromage, Andrew Koff, James M. Roberts, Paul Tempst and Joan Massague, "Cloning of P27.sup.Kipl, A Cyclin-Dependent Kinase Inhibitor and a Potential Mediator of Extracellular Antimitogenic Signals,"Cell, vol. 78, Jul. 15, 1994, pp. 59-66. cited by other.
Richard A. Steinman, Barbara Hoffman, Augustine Iro, Christel Guillouf, Dan A. Lieberman and Motawa E. El-Houseini, "Induction of p21 (WAF-1/CIP1) During Differentiation," Oncogene, 1994, pp. 3389-3396. cited by other.
Hongping Jiang, Jian Lin, Zao-Zhong, Su, Frank R. Collart, Eliezer Huberman and Paul B. Fisher, "Induction of Differentiation in Human Promyelocytic HL-60 Leukemia Cells Activates p21, WAF1/CIP1, Expression in the Absence of p53," Oncogne, 1994, pp.3397-3406. cited by other.
M. Saeed Sheikh, Xiao-Su Li, Jian-Chyi Chen, Zhi-Ming Shao, Jose V. Ordonex and Joseph A. Fontana, "Mechanisms of Regulation of WAF1/Cip1 Gene Expression in Human Breast Carcinoma: Role of P53-Dependent and Independent Signal Transduction Pathways,"Oncogne, 1994, pp. 3407-3415. cited by other.
Paolo Michieli, Marcio Chedid, David Lin, Jacalyn H. Pierce, W. Edward Mercer and David Givol, "Induction of WAF1/CIP1 by a P53-Independent Pathway," Cancer Research, Jul. 1, 1994, pp. 3391-3395. cited by other.
Wafik S. El-Deiry, J. Wade Harper, Patrick M. O'Connnor, Victor E. Velculescu, Christine E. Canman, Joany Jackman, Jennifer A. Pierenpol, Marilee Burrell, David E. Hill, Yisong Wang, Klas G. Wiman, W. Edward Mercer, Michael B. Kastan, Kurt W. Kohn,Stephen J. Elledge, Kenneth W. Kinzler and Bert Vogelstein, "WAF1/CIP1 is Introduced in P53-Mediated G1 Arrest and Apoptosis," Cancer Research, Mar. 1, 1994, pp. 1169-1174. cited by other.
Susan B. Parker, Gregor Eichele, Pumin Zhang, Alan Rawls, Arthur T. Sands, Allan Bradley, Eric N. Olson, J. Wade Harper and Stephen J. Elledge, "P53-Independent Expression of p21.sup.CIP1 in Muscle and Other Terminally Differentiating Cells,"Science, vol. 267, Feb. 17, 1995, pp. 1024-1027. cited by other.
Vjekoslav Dulic, William K. Kaufmann, Sandra J. Wilson, Thea D. Tisty, Emma Lees, J. Wade Harper, Stephen J. Elledge and Steven I. Reed, "P53-Dependent Inhibitor of Cyclin-Dependent Kinase Activities in Human Fibroblasts During Radiation-Induced G1Arrest," Cell, vol. 76, Mar. 25, 1994, pp. 1013-1023. cited by other.
J. Wade Harper, Stephen J. Elledge, Khandan Keyomarsi, Brian Dynlacht, Li-Huei Tsai, Pumin Zhang, Steven Dobrowolski, Chang Bai, Lisa Connell-Crowley, Eric Swindell, M. Pat Fox and Nan Wei, "Inhibition of Cyclin-Dependent Kinases by p21," MolecularBiology of the Cell, Apr. 1995, vol. 6, pp. 387-400. cited by other.
Shou Waga, Gregory J. Hannon, David Beach and Bruce Stillman, "The p21 Inhibitor of Cyclin-Dependent Kinases Controls DNA Replication by Interaction with PCNA," Nature, vol. 369, Jun. 16, 1994, pp. 574-578. cited by other.
Hernan Flores-Rozas, Zvi Kelman, Frank B. Dean, Zhen-Qiang Pan, J. Wade Harper, Stephen J. Elledge, Michael O'Donnell and Jerard Hurwitz, "Cdk-Interacting Protein 1 Directly Binds with Proliferating Cell Nuclear Antigen and Inhibits DNA ReplicationCatalyzed by the DNA Polymerase Holoenzyme," Proc. Natl. Acad. Sci. USA, vol. 91, Aug. 1994, pp. 8655-8659. cited by other.
Stephen J. Elledge and J. Wade Harper, "Cdk Inhibitors: on the Threshold of Checkpoints and Development," Biology, 1994, pp. 847-852. cited by other.
Manual Serrano, Gregory J. Hannon and David Beach, "A New Regulatory Motif in Cell-Cycle Control Causing Specific Inhibition of Cyclin D/CDK4," Nature, vol. 366, Dec. 16, 1993, pp. 704-707. cited by other.
Asao Noda, Yi Ning, Susan F. Venable, Olivia M. Pereira-Smith and James R. Smith, "Cloning of Senescent Cell-Derived Inhibitors of DNA Synthesis Using an Expression Screen," Experimental Cell Research 1994, pp. 90-98. cited by other.
Yue Xiong, Gregory J. Hannon, Hui Zhang, David Casso, Ryuji Kobayashi and David Beach, "p21 is a Universal Inhibitor of Cyclin Kinases," Nature, vol. 366, Dec. 16, 1993, pp. 701-704. cited by other.
Wafik S. El-Diery, Takashi Tokino, Victor E. Velculescu, Daniel B. Levy, Ramon Parsons, Jeffrey M. Trent, David Lin, W. Edward Mercer, Kenneth W. Kinzler and Bert Vogelstein, "WAF1, A Potential Mediator of p53 Tumor Supression," Cell, vol. 75, Nov.19, 1993, pp. 817-825. cited by other.
Mark J. Solomon, "Activation of the Various Cyclin/cdc2 Protein Kinases," Cell Biology, 1993, pp. 180-186. cited by other.
Charles J. Sherr, "G1 Phase Progression: Cycling on Cue," Cell, vol. 79, Nov. 18, 1994, pp. 551-555. cited by other.
Dawn Coverely, Mark Jackman and Julia Turner, "Cyclins and Cyclin-Dependent Kinases: Take Your Partners," TIBS, Jun. 1993, pp. 195-197. cited by other.
Tsutomu Nobori, Kaoru Miura, David J. Wu, Augusto Lois, Kenji Takayashi and Dennis A. Carson, "Deletions of the Cyclin-Dependent Kinase-4 Inhibitor Gene in Multiple Human Cancers," Nature, vol. 368, Apr. 21, 1994, pp. 753-756. cited by other.
Kun-Liang Guan, Christopher W. Jenkins, Yan Li, Michael A. Nicols, Xiaoyu Wu, Christine L. O'Keefe, A. Gregory Matera and Yue Xiong, "Growth Suppression by p18, a p16.sup.INK4/MTS1 and p14.sup.INK4B/MITS2--Related CDK6 Ibhibitor, Correlates withWild-Type pRb Function," Genes and Development, 1994, pp. 2939-2952. cited by other.
Jacob W. Udo, Elizabeth A. Lindsay, Richard A. Wells and Antonio Baldini, "Multiple Variants in Subtelomeric Regions of Normal Karyotypes," Genomics, 1992, pp. 1019-1025. cited by other.
Olof H. Sudin, Heinz G. Busse, Melissa B. Rogers, Lorraine J. Gudas and Gregor Eichele, "Region-Specific Expression in Early Chick and Mouse Embryos of Ghox-Lab and Hox 1.6, Vertebrate Home,box-Containing Genes Related to Drosophila Labial,"Development, 1990, pp. 47-58. cited by other.
Beat Lutz, Shigeru Kuratani, Austin J. Cooney, Stefan Wawersik, Sophia Y. Tsai, Gregor Eichele and Ming-Jer Tsai, "Developmental Regulation of the Orphan Receptor Coup-RFII Gene in Spinal Motor Neurons," Development, 1994, pp. 25-36. cited by other.
Tim Durfee, Kathleen Becherer, Phang-Lang Chen, Shiou-Hwei Yeh, Yanzhu Yang, April E. Kilburn, Wen-Hwa Lee and Stephen J. Elledge, "The Retinoblastoma Protein Associates with the Protein Phosphatase Type 1 Catalytic Subunit" Dec. 18, 1992, pp.555-569. cited by other.
Charles H. Spruck III, Mirella Gonzalez-Zulueta, Atsuko Shibata, Anne R. Simoneau, Ming-Fong Lin, Felicidad Gonzales, Yvonne C. Tsai and Peter A. Jones, "p16 Gene in Uncultured Tumours," Nature, vol. 370, Jul. 21, 1994, pp. 183-184. cited by other.
Alexander Kamb, Qingyun Liu, Keith Harshman and Sean Tavtigian, "Rates of p16 (MTS1) Mutations in Primary Tumors with 9p Loss," Science, vol. 165, Jul. 15, 1994, pp. 415-417. cited by other.
M.J. Pettenati, J.L. Haines, R.R. Higgins, R.S. Wappner, C.G. Palmer and D.D. Weaver, "Wiedemann-Beckwith Syndrome: Presentation of Clinical and Cytogentic Data on 22 New Cases and Review of the Literature," Human Genetics, 1986, pp. 143-154. citedby other.
N.D. Hastie, "The Genetics of Wilms' Tumor--A Case of Disrupted Development," Annu. Rev. Genet., 1994, pp. 523-558. cited by other.
B.R. Seizinger, H.P. Klinger, C. Junien, Y. Nakamura, M. Le Beau, W. Cavenee, B. Emanuel, B. Ponder, S. Naylor, F>Mitelman, D. Louis, A. Menon, I. Newsham, J. Decker, M. Kaelbling, I. Henry, A.v. Deimling, "Report of the Committee on Chromosomeand Gene Loss in Human Neoplasia," Cytogenet Cell Genet, 1991, pp. 1080-1096. cited by other.
Ueli Gubler and Beth J. Hoffman, "A Simple and Very Efficient Method for Generating cDNA Libraries," Elsevier Science Publishers, 983, pp. 263-269. cited by other.
F. L. Graham and A.J. Van Der Eb, "A New Technique for the Assay of Infectivity of Human Adenovirus 5 DNA," Virology 52, 1973, pp. 456-467. cited by other.
Dan Y. Wu and R. Bruce Wallace, "The Ligation Amplification Reaction (LAR)--Amplification of Specific DNA Sequences Using Sequential Rounds of Template-Dependent Ligation," Genomics, 1989, pp. 560-569. cited by other.
Stephen J. Elledge and J. Wade Harper, "Cdk Inhibitors: on the Threshold of Checkpoints and Development," Cell Biology, 1994, pp. 847-852. cited by other.
Mark G. Alexandrow and Harold L. Moses, "Transforming Growth Factor B and Cell Cycle Regulation," Cancer Research, Apr. 1, 1995, pp. 1452-1457. cited by other.
Kim Nasmyth and Tim Hunt, "Dams and Sluices," Nature, vol. 366, Dec. 16, 1993, pp. 634-635. cited by other.
Tony Hunter and Jonathon Pines, "Cyclins and Cancer II: Cyclin D and CDK Inhibitors Come of Age," Cell, vol. 79, Nov. 18, 1994, pp. 573-582. cited by other.
Jesse Martinex, Ingo Georgoff, Joanne Martinez and Arnold J. Levine, "Cellular Localization and Cell Cycle Regulation by a Temperature-Sensitive p53 Protein," Genes and Development, 1991, pp. 151-159. cited by other.
Sander van den Heuvel and Ed Harlow, "Distinct Roles for Cyclin-Dependent Kinases in Cell Cycle Control," Science, vol. 262, Dec. 24, 1993, pp. 2050-2054. cited by other.
Liang Zhu, Sander van den Heuvel, Kristian Helin, Ali Fattaey, Mark Ewen, David Livingston, Nicholas Dyson and Ed Harlow, "Inhibition of Cell Proliferation by p107, A Relative of the Retinoblastoma Protein," Genes and Development, 1993, pp.1111-1125. cited by other.
Stephen J. Elledge, Ronald Richman, Frederick L. Hall, Richard T. Williams, Naomi Lodgson and J. Wade Harper, "CDK2 Encodes A 33-KDA Cyclin A-Associated Protein Kinase and is Expressed Before CDC2 in the Cell Cycle," Proc. Natl. Acad. Sci. USA, vol.89, Apr. 1992, pp. 2907-2911. cited by other.
Hui Zhang, Gregory J. Hannon and David Beach, "p-21 Containing Cyclin Kinases Exist in Both Active and Inactive States," Genes & Development, 1994, pp. 1750-1758. cited by other.
Nat Sternberg, "Bacteriophage P1 Cloning System for the Isolation, Amplification, and Recovery of DNA Fragments as Large as 100 Kilobase Pairs," Proc. Natl. Acad. Sci. USA, vol. 87, Jan. 1990, pp. 103-107. cited by other.
Matthew Meyerson and Ed Harlow, "Identification of G1 Kinase Activity for cdk6, A Novel Cyclin D Partner," Molecular and Cellular Biology, Mar. 1994, vol. 14, No. 3, pp. 2077-2086. cited by other.
Hitoshi Matsushime, Mark E. Ewen, David K. Strom, Jun-Ya Kato, Steven K. Hanks, Martine F. Roussel and Charles J. Sherr, "Identification and Properties of an Atypical Catalytic Subunit (P34.sup.psk-j3/CDK4) For Mammalian D Type G1 Cyclins," Cell,vol. 71, Oct. 16, 1992, pp. 323-334. cited by other.
Giulio Draetta, "CDC2 Activation: The Interplay of Cyclin Binding and THr161 Phosphorylation," Trends in Cell Biology, vol. 3, Sep. 3, 1993, pp. 287-289. cited by other.
Claudine Junien, "Beckwith-Wiedemann Syndrome, Tumourigenesis and Imprinting," Current Biology, 1992, pp. 431-438. cited by other.
John Wiley & Sons, Inc., "Current Protocols in Molecular Biology, vol. 1," 1994, Section III, 8 pages. cited by other.
Orna Halevy, Bennett G. Novitch, Douglas B. Spicer, Stephen X. Skapek, James Rhee, Gregory J. Hannon, David Beach and Andrew B. Lassar, "Correlation of Terminal Cell Cycle Arrest of Skeletal Muscle With Induction of p21 by MyoD," Science, vol. 267,Feb. 17, 1995, pp. 1018-1021. cited by other.
L. Breeden and K. Nasmyth, "Regulation of the Yeast Ho Gene," pp. 643-650 (no date). cited by other.

Abstract: The present invention relates to the isolation of gene sequences encoding mammalian cell cycle checkpoints, as well as the expression of the encoded proteins using recombinant DNA technology. The expressed proteins are used to generate specific antibodies and to inhibit the growth of cells. The human checkpoint gene sequences are used as a probe for a portion of the chromosome associated with tumors and other malignancies, as well as growth and/or development deficiencies.
Claim: What is claimed is:

1. A purified .Iadd.human .Iaddend.protein.Iadd., wherein the protein is a polypeptide having checkpoint kinase activity and .Iaddend.encoded by .[.the nucleotide sequenceof.]. SEQ ID NO: 3.

2. A purified .Iadd.human .Iaddend.protein .[.comprising the amino acid sequence set forth in.]. .Iadd.having checkpoint kinase activity, wherein the protein comprises .Iaddend.SEQ ID NO: 1.

3. A fusion protein comprising .[.a portion of.]. at least 15 sequential amino acids of .[.the.]. .Iadd.a .Iaddend.carboxy-terminus .[.of the CHK1 protein of claim 2,.]. .Iadd.sequence of SEQ ID NO:1 .Iaddend.and a non-.[.CHk1.]. .Iadd.Chk1.Iaddend.protein .[.sequence.]. .

4. The fusion protein of claim 3, wherein said non-Chk1 protein sequence .[.comprises.]. .Iadd.is combined with .Iaddend.an affinity tag .Iadd.for purification of the fusion protein.Iaddend..

5. The fusion protein of claim 4, wherein said affinity tag .[.comprises.]. .Iadd.is .Iaddend.a histidine tag.

6. A purified .[.Chk1.]. protein .[.encoded by the nucleotide sequence.]. of claim 5.

.Iadd.7. The fusion protein of either claim 3 or claim 6, wherein the non-Chk1 protein is glutathione S-I transferase..Iaddend.
Description:
 
 
  Recently Added Patents
Console cooler
Methods and systems for supporting the production of shipping labels
Double contrast technique for MRI-guided vascular interventions
Method for feedback circuit design
Stimulus regimens for cardiovascular reflex control
Thermoplastic core having a negative hardness gradient formed from a plasticizer-based gradient-initiating solution
Method and apparatus for routing data in an automatic identification system
  Randomly Featured Patents
Method of resolving ambiguity in photon counting-based detectors
Directionally solidified nickel-base eutectic alloys
Lighting control apparatus
Pressure indicator
Method and apparatus for producing an hf-induced noble-gas plasma
Method and apparatus for electrodeposition of a metallurgically bondable circuitized flexible substrate
Method for automated production of ceramic dental restorations and prostheses
Communication terminal apparatus and communication conference system
System and method of constructing a photo album
Vacuum cardiac stabilizer with geometrically stable porous plug