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Epoch Biosciences, Inc. Patents
Assignee:
Epoch Biosciences, Inc.
Address:
Bothell, WA
No. of patents:
26
Patents:




Patent Number Title Of Patent Date Issued
RE38416 Cross-linking oligonucleotides February 3, 2004
This invention is directed to novel substituted nucleotide bases with a crosslinking arm which accomplish crosslinking between specific sites on adjoining strands of oligonucleotides a oligodeoxynucleotides. The invention is also directed to oligonucleotides comprising at least one of
7381818 Fluorescent probes containing 5'-minor groove binder, fluorophore and quenching moieties and met June 3, 2008
Minor groove binder-oligonucleotide probes are provided along with methods for their use wherein the probes have an attached fluorophore which, in an unhybridized form exhibits very low background signal.
7368549 T.sub.m leveling compositions May 6, 2008
Modified oligonucleotides are provided containing bases selected from unsubstituted and 3-substituted pyrazolo[3,4-d]pyrimidines and 5-substituted pyrimidines, and optionally have attached minor groove binders and reporter groups.
7348146 Single nucleotide polymorphism analysis of highly polymorphic target sequences March 25, 2008
Methods and probes are provided for the analysis of target sequences having two or more polymorphisms wherein one of the polymorphisms is to be distinguished and another polymorphism is to be masked.
7319022 Amplification methods January 15, 2008
Methods are provided for amplification and monitoring of oligonucleotide amplification in which a primer has an overlap with one or more bases of a detection probe.
7297495 Hybridization-triggered fluorescent detection of nucleic acids November 20, 2007
Compositions and methods for fluorescent detection of nucleic acids are provided. The compositions can be detected by fluorescence when hybridized to a nucleic acid containing a target sequence, but are non-fluorescent in the non-hybridized state. Alternatively, the fluorescence prop
7252940 Abasic site endonuclease assay August 7, 2007
The present invention provides a novel method for detection and/or genotyping of nucleic acids that utilizes the specificity of an AP endonuclease. In addition, the present invention provides a novel method for nucleic acid amplification.
7205105 Real-time linear detection probes: sensitive 5'-minor groove binder-containing probes for PCR an April 17, 2007
Oligonucleotide probes/conjugates are provided along with method for their use in assays to monitor amplification wherein the signal produced does not rely on 5' nuclease digestion.
7112684 Compounds and methods for fluorescent labeling September 26, 2006
Dye reagents useful in labeling biological materials are provided along with methods for their use.
7045610 Modified oligonucleotides for mismatch discrimination May 16, 2006
Modified oligonucleotides are provided containing bases selected from unsubstituted and 3-substituted pyrazolo[3,4-d]pyrimidines and 5-substituted pyrimidines, and optionally have attached minor groove binders and reporter groups.
6972339 Compounds and methods for fluorescent labeling December 6, 2005
Dye reagents useful in labeling biological materials are provided along with methods for their use.
6972328 Non-aggregating non-quenching oligomer comprising nucelotide analogs, method of synthesis and us December 6, 2005
The invention provides compositions and methods for improved hybridization analysis utilizing DNA, RNA, PNA and chimeric oligomers in which one or more purine bases are substituted by a pyrazolo[5,4-d]pyrimidine or by a 7-deazapurine purine analogue. Reduced self-aggregation and reduced
6962991 Process for the synthesis of pyrazolopyrimidines November 8, 2005
The present invention provides a nucleoside comprising a pyrazolopyrimidine base and a process for producing the same. In particular, the processes of the present invention comprises using a halogenated pyrazolopyrimidine base and removing the halogen after the base is coupled to a sugar
6951930 Hybridization-triggered fluorescent detection of nucleic acids October 4, 2005
Compositions and methods for fluorescent detection of nucleic acids are provided. The compositions can be detected by fluorescence when hybridized to a nucleic acid containing a target sequence, but are non-fluorescent in the non-hybridized state. Alternatively, the fluorescence properti
6884584 Hybridization and mismatch discrimination using oligonucleotides conjugated to minor groove bind April 26, 2005
Conjugates between a minor groove binding molecule, such as the trimer of 1,2-dihydro-(3H)-pyrrolo[3,2-e]indole-7-carboxylate (CDPI.sub.3), and an oligonucleotide form unusually stable hybrids with complementary target sequences, in which the tethered CDPI.sub.3 group resides in the mino
6790945 Fluorescent quenching detection reagents and methods September 14, 2004
Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
6699975 Fluorescent quenching detection reagents and methods March 2, 2004
Oligonucleotide-fluorophore-quencher conjugates wherein the fluorophore moiety has emission wavelengths in the range of about 300 to about 800 nm, and or where the quencher includes a substituted 4-(phenyldiazenyl)phenylamine structure provide improved signal to noise ratios and othe
6683173 Tm leveling methods January 27, 2004
Modified oligonucleotides are provided containing bases selected from unsubstituted and 3-substituted pyrazolo[3,4-d]pyrimidines and 5-substituted pyrimidines, and optionally have attached minor groove binders and reporter groups.
6660845 Non-aggregating, non-quenching oligomers comprising nucleotide analogues; methods of synthesis a December 9, 2003
The invention provides compositions and methods for improved hybridization analysis utilizing DNA, RNA, PNA and chimeric oligomers in which one or more purine bases are substituted by a pyrazolo[5,4-d]pyrimidine or by a 7-deazapurine purine analogue. Reduced self-aggregation and reduced
6653473 Fluorescent quenching detection reagents and methods November 25, 2003
Oligonucleotide probes containing two labels are provided and are useful in hybridization assays. The probes can also contain a minor groove binding group.
6548652 Attachment of oligonucleotides to solid supports through schiff base type linkages for capture a April 15, 2003
Derivatized oligonucleotides (ODNs) are coupled to a solid support in improved yield resulting in a high density of coupled oligonucleotide per surface unit of the support, through a Schiff base type bond formed between an NH.sub.2 group attached either to the solid support or to the
6486308 Covalently linked oligonucleotide minor groove binder conjugates November 26, 2002
Minor groove binding molecules are covalently bound to oligonucleotides which in their base sequence are complementary to a target sequence of single stranded or double stranded DNA, RNA or hybrids thereof. The covalently bound oligonucleotide minor groove binder conjugates strogly b
6472153 Hybridization-triggered fluorescent detection of nucleic acids October 29, 2002
Compositions and methods for fluorescent detection of nucleic acids are provided. The compositions can be detected by fluorescence when hybridized to a nucleic acid containing a target sequence, but are non-fluorescent in the non-hybridized state. Alternatively, the fluorescence properti
6441159 Attachment of oligonucleotides to solid supports through Schiff base type linkages for capture a August 27, 2002
Derivatized oligonucleotides (ODNs) are coupled to a solid support in improved yield resulting in a high density of coupled oligonucleotide per surface unit of the support through a Schiff base type bond formed between an NH.sub.2 group attached either to the solid support or to the ODN
6426408 Covalently linked oligonucleotide minor groove binder conjugates July 30, 2002
Minor groove binding molecules are covalently bound to oligonucleotides which in their base sequence are complementary to a target sequence of single stranded or double stranded DNA, RNA or hybrids thereof. The covalently bound oligonucleotide minor groove binder conjugates strogly b
6339147 Attachment of oligonucleotides to solid supports through Schiff base type linkages for capture a January 15, 2002
Derivatized oligonucleotides (ODNs) are coupled to a solid support in improved yield resulting in a high density of coupled oligonucleotide per surface unit of the support, through a Schiff base type bond formed between an NH.sub.2 group attached either to the solid support or to the

 
 
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